rs52205024 SNP Detail

Summary

• ID
  rs52205024
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:108714200 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGGAATAATT AGGACTTGGA ACTCACATTG AGATTGGGAT
  TTCTTTCTTT TTCTTCTTTT TGGTTTTCCG AGATAGGGTT TCTGTGTATA GCCCTGGCTG
  K
  CCTGGAACTC ACTCTGCAGA CCAGGCTGGC CTTGAACTCA GAAATCCGCC TGCCTCTGCC
  TCCCAAGTGC TGGGATTAAA GGCGTGTGCC ACCATGCCC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss133508273	ENSMUSSNP6359415	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs52205024					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108714200 () rs orientation: forward

Symbol	Name	Function Class
Rr636189	regulatory region 636189	651 bp distal
Rr636190	regulatory region 636190	890 bp distal
Rr636191	regulatory region 636191	1080 bp proximal