rs52202723 SNP Detail

Summary

• ID
  rs52202723
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:148218279 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T CTCTCTCTCT CTCTCTCTAT GTCTCTATGT CTCTGTCTGT
  CTCTCTGTCT CTGTCTCTGT CTCTCTGTCT CTGTCTCTGT CTCTCTCTCT CTCTCTCTCT
  G
  TCTCTCTCTC TCTCTCTCTC TCTCTCAGTA CATTGAGTTA ATGGACAGCC TTTTATCTCC
  ACTATCCCCA TACCCCATCA AGCTACTGGC TTTACCCAAA G                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss147923826	ENSMUSSNP2639135	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs52202723					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:148218279 () rs orientation: forward

Symbol	Name	Function Class
Gm39957	predicted gene, 39957	within coordinates
Rr566887	regulatory region 566887	252 bp distal
Rr566888	regulatory region 566888	828 bp distal
Rr566889	regulatory region 566889	447 bp distal