rs52197132 SNP Detail

Summary

• ID
  rs52197132
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:121365077 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A TCCTTTTCAT GTTACAACTA TGTGGTTTAG TTTCATAGAT
  CCTTGGCCAG CTTTCTGTGT CTCTGTCTCT GTCTCTCTTT TCTTCTTTCT TTTGTTCGTT
  T
  GTTCGTTCGT TCTGGAACTC ACTCTGTAGA CCAGGCTGGC CTCGAACTCA GAAATCCGCC
  TGCCTCTGCC TCCCAAGTGC TGGGATTAAA GGCGTGTGCC A                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss147389694	ENSMUSSNP2875687	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs52197132					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:121365077 () rs orientation: forward

Symbol	Name	Function Class
Rr563846	regulatory region 563846	985 bp distal
Wdr76	WD repeat domain 76	Intron