rs52195152 SNP Detail

Summary

• ID
  rs52195152
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:12626724 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTAAACCAC CAACCAAAGA
  GTACACATGG GGGGACCCAT GGCTCCAGCT GCATAAGAAT CAGAAGATGA CCTTATCTGG
  CATCAGTGGG AGGGGAGGCC CTTGGTCCTG TGAAGGCTTG ATGCCGGGGC AGTGAGGTGG
  GAGTGGGTGG GTGGGTGGGG GAGCACCCTC ATAGAAGCAG GGGGAGGGGA AGGGGATTTG
  Y
  AGGGGAGAAA CCAGGAAAGG CAATATCATT TGAAATGTAA ATAAATAAAA TAACCAAAAA
  AAAAAATTAA AAAATAAGCC TTCTTGTCAT TAACTCTATA TGAGCTAGTA CCTCCAAATA
  AATACACAAT CCTAATGTAT GAAGTAATGC AGGCAATCTT AGTTTGTGAA CTAATACTGA
  CAATGGAGTC TCAAAACAAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MSM/Ms
ss146023310	ENSMUSSNP3772518	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MSM/Ms
rs52195152					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:12626724 () rs orientation: forward

Symbol	Name	Function Class
Gm37985	predicted gene, 37985	within coordinates
Rr589092	regulatory region 589092	370 bp proximal
Rr589093	regulatory region 589093	1769 bp proximal