rs52183807 SNP Detail

Summary

• ID
  rs52183807
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:137307917 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATCA GTTCTAGGAC AGGACAGCTA
  A
  GACTACATGA AGAAACCCTG TCTTC                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147612428	ENSMUSSNP872419	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs52183807					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137307917 () rs orientation: forward

Symbol	Name	Function Class
Gm70277	predicted gene, 70277	within coordinates
Gm70281	predicted gene, 70281	1264 bp downstream
Ldlrad2	low density lipoprotein receptor class A domain containing 2	Intron
Rr602652	regulatory region 602652	450 bp distal
Rr602653	regulatory region 602653	1360 bp proximal
Rr602654	regulatory region 602654	1488 bp proximal