rs52181386 SNP Detail

Summary

• ID
  rs52181386
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:31027767 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GGTTGGTCTC TGGGTATGTC TGTAGGCTGC CTTAATTAAA
  TTAATTGATG TGGAAAGGGC AGCACCATTC CCTGTGGAAC TCTCTCACTC TTCTTCTCTT
  T
  ATCGCTCTCT TTCTCTATCT CTCTTTCTCT CTCTCCTTCT CACTCTGTCC CAGTCAGGAC
  TTTCACACTT CTGCCATGAT ATTCCACCTC ACCACAGGCC T                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss134734231	ENSMUSSNP5564844	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs52181386					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:31027767 () rs orientation: forward

Symbol	Name	Function Class
Gm2979	predicted gene 2979	1031 bp upstream
Rr574844	regulatory region 574844	1710 bp proximal
Rr574845	regulatory region 574845	1962 bp proximal