rs52179457 SNP Detail

Summary

• ID
  rs52179457
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:118408661 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAGA AGAAGAAGAA GAAGAAGAAG
  C
  AGCTGAATTC AGAGGAAGCA CTATG                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321662392	CHEV_5_118720605	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs52179457					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:118408661 () rs orientation: forward

Symbol	Name	Function Class
Gm73266	predicted gene, 73266	within coordinates
Rr618848	regulatory region 618848	1332 bp distal
Rr618849	regulatory region 618849	1381 bp distal
Rr618850	regulatory region 618850	872 bp distal