rs52175956 SNP Detail

Summary

• ID
  rs52175956
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:119830018 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTCTAAAGA AAAAAAAAAA AAAAAAAAGA AGGAAGGAAT
  GAAGAAAGGA AGGAAGGGAA AGGAAAGAAA GAGAGAGAGA AAGAAAGAAA GAGGGAGAAA
  R
  AGAAAGAAAC CAAATTAAGA TGGTCTGTTA CCGAAATAGA TAGAAAACTG ATTATGAGAG
  AGAAACTCAG GCTGGAGAGA TGGCTCATCG ATTAAGAGC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321929497	CHEV_6_119803075	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs52175956					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119830018 () rs orientation: forward

Symbol	Name	Function Class
Rr380000	regulatory region 380000	895 bp upstream
Rr637739	regulatory region 637739	1218 bp proximal