rs52130368 SNP Detail

Summary

• ID
  rs52130368
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:87471624 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACACA TACGCTTATA TGGCTATATA
  C
  GCATGTATAT ACGTATATAT GAACA                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135464170	ENSMUSSNP5848371	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss320834280	CHEV_3_87368239	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs52130368					SNP	C	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87471624 () rs orientation: forward

Symbol	Name	Function Class
Rr579522	regulatory region 579522	1503 bp distal
Rr579523	regulatory region 579523	1737 bp distal
Rr579524	regulatory region 579524	1047 bp proximal