rs52119550 SNP Detail

Summary

• ID
  rs52119550
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:145322669 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C ATCCACTGAA AAAGACCAAC CATGCCCAGA GTGTACCCAC
  TGGAGCAAGC CACACCAGGA CACAGACACA GACACAGACA GACAGACAGA CAGACAGACA
  G
  ACACACACAC ACACACACAC ACACACACAC ACCAGAGCAA GCAAAAGGAA CTGCCGTGAG
  CCCTCCCCTG GCTACAGTGC GCATTAAGCC CCACTACAGT G                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss136039463	ENSMUSSNP2051168	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs52119550					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:145322669 () rs orientation: forward

Symbol	Name	Function Class
Rr586798	regulatory region 586798	1800 bp distal
Rr586799	regulatory region 586799	1306 bp proximal