rs52118483 SNP Detail

Summary

• ID
  rs52118483
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:106089531 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T GCTTATGAAG TAGGCACTCT AACCACTGAG CCATCCTGCT
  GGCCCCATTT CATATTCTAA ACATGAAAAG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG
  Y
  ATGTGATGTG CCTGTGTCAC TGGTTCAAGG TGTAAAACAT TTTTTCTCAC TGTAGGCTAC
  AGTAAAAAGT GTTTGAAGTT GGTAACTTGG CAAGTGTTAG C                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147165272	ENSMUSSNP484743	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs52118483					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106089531 () rs orientation: forward

Symbol	Name	Function Class
Gm12729	predicted gene 12729	within coordinates
Rr596710	regulatory region 596710	1912 bp distal
Rr596711	regulatory region 596711	within coordinates