rs52112422 SNP Detail

Summary

• ID
  rs52112422
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148049454 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTTT CTTTTCTTTT CTTTTCTTTT
  C
  CATAGTTGTC TCTAACTCTA GTTAT                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321416055	CHEV_4_147339106	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs52112422					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148049454 () rs orientation: forward

Symbol	Name	Function Class
Gm69767	predicted gene, 69767	1298 bp upstream
Rr407044	regulatory region 407044	720 bp distal
Rr407312	regulatory region 407312	1047 bp distal
Rr604537	regulatory region 604537	1706 bp distal
Rr604538	regulatory region 604538	1309 bp distal
Rr604539	regulatory region 604539	808 bp distal
Rr604540	regulatory region 604540	671 bp proximal