rs52103076 SNP Detail

Summary

• ID
  rs52103076
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:95183717 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGAGAGAGA GAGAGAGAGA
  GAGAGAGAGA GACCCTGTCT TGAAAAGCAA CAAAACAAAA ACAGCACTTG TTCTTGCAGA
  GGACTCTAGT TTGGTTTCCA ACATCTACAG AGTGGCTCAA AACCATCCCC TAACATCTAT
  TTCAGAGGAT CTGACACCTT CTTTCTTTTG AGAGCAACAG GCATGCATGT GATGTCCGTA
  Y
  ATACAGACAA GAAAAATACT CATACACATA AAAAAATAGG TCTAAAAAAA TTTGGTTTTA
  GAGAAAAAGG AAGACCATTA GTTGAAATAA TATATCCTGA AGTGTCTGTC TGTCTGTCTG
  ATGGCCTGGA AGGCAGGCAA GAAGAGGGTT TAGGGGGGAA AAAAAAACCA CTTCCCTTCT
  GAGGATGACT ATGGTCGATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135510446	ENSMUSSNP942457	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52103076					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95183717 () rs orientation: forward

Symbol	Name	Function Class
Prune1	prune exopolyphosphatase	Intron
Rr580883	regulatory region 580883	1742 bp distal
Rr580884	regulatory region 580884	551 bp proximal