rs52101841 SNP Detail

Summary

• ID
  rs52101841
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:142983658 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTGTCTAC AAAGTGAGTT
  CCAGGACAGC CAGGGCTATA CAGAGAAATC CTGTCTCAAA AAAACAAAAC AAAACAAAAA
  AAAAGTTAAA GATGACTATG GTTGATGAAT ACATATGTAA ATTTCAGTGG ATTTATAATA
  ATCAAGGTGA GATGGGAAGA CATAGAAAGA AAAGAAAAAA TGAAGGGAAA AAGAAAAACA
  K
  CAACTCAGAA GAAAAAAAAA AGTATTAATC ATGTCACCCG AGGGTAGCCA GAACATCAAA
  TCCTGACTTG ATAATTAAAG GGAATAAATG AAAGAAGACC CCTCCTGTTC CATGGGAACC
  GTAATTGCCA TTGTTGAATA TTCCTATTGG ACAGGGAAAG CCTGACGTCA CAGGCAAATC
  CCATCTGACA GAGCTGTAAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147777682	ENSMUSSNP7067660	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52101841					SNP	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:142983658 () rs orientation: forward

Symbol	Name	Function Class
Rr604180	regulatory region 604180	1383 bp proximal
Rr604181	regulatory region 604181	1691 bp proximal