rs52098218 SNP Detail

Summary

• ID
  rs52098218
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:108728725 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGCTGGAG CGATGGCTCA
  GTGAGTAGTG GTGGCTGCCC CGTGTATGAG CAAATCCCAG AACCGACACA GTTAGTGGAG
  GGAGATAACC AATTTCTGAC TTCTGCATGT GTGCCACGGC ATGTTCTCTC TTTCTCTTGA
  AAATTAAACA AAAAAAAAAA AAAGAAAGAA AGAAAGAAAG AAAGAAAGAA AAGAAATTGA
  S
  TATGTTTTAA AAATAACAAC AACAAAAAAA GGAAACTTAC TATTTTATAC AATTACTGAC
  AAAAGGTTTG GTGAAAAATT ATTGTTGTCT GCCCTAGGTT TTGTCATTCA GTGTTTGGAA
  TACAAAGGAA TCTGTTGAAG AGGCAAAGGT TCTTTCAATA CAGCCACATT CTTGCAAGGA
  CTGGAGAAAA AGCACCTGTG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss133508740	ENSMUSSNP2830738	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
ss321893982	CHEV_6_108701758	CHEVERUD	SCREENING_POP	f	SNP			G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs52098218					SNP	C	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108728725 () rs orientation: forward

Symbol	Name	Function Class
Rr636193	regulatory region 636193	953 bp proximal