rs52086587 SNP Detail

Summary

• ID
  rs52086587
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148379790 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A CATCTGGCAG ATGTGTCTGC AGGATGCAGA AGGAATGTGT
  GAGTAGCCTC TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGAGTGTG TGTGTGAGAG
  T
  GTGTGTGAGT GTGTGTGAGA GAGTGTGTGT GAGTGTGTGT GTGAGCGGCC TAGCCAAAGC
  TGCTGCTGGC TGTACCTGAA AAATTAGTTT GATGATTTTC C                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss148000538	ENSMUSSNP6150450	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs52086587					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148379790 () rs orientation: forward

Symbol	Name	Function Class
Rr604648	regulatory region 604648	1595 bp distal