rs52082717 SNP Detail

Summary

• ID
  rs52082717
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135753232 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GCCTTCCTTT TTGTTCTGTT ACTAATGTCA TAAGGACAGC
  CAGGGCTATA CAGAAAAACC CTGTCTTGAA ATAACAACAA TAACAACAAA CAAAAAAAAA
  A
  CCAAAAAACA AAAAACAAAA ACAAACAAAC AAAAAACTTC CTCACATGTT GTCACTAGGA
  TGTTCTGTGC TTTGGTGTTC TTGGAAACCA TTCTCAATAC A                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss147556102	ENSMUSSNP4258494	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs52082717					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135753232 () rs orientation: forward

Symbol	Name	Function Class
Gm68304	predicted gene, 68304	494 bp downstream
Rr602242	regulatory region 602242	398 bp distal
Rr602243	regulatory region 602243	1557 bp proximal