rs52082124 SNP Detail

Summary

• ID
  rs52082124
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:103900113 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T ACAGTACTCA TATAGCCAAA GCTATACAGT GTGACCCTGT
  GTCAAAACTA TCTACTGTAA ACAGTGACAC CCTGTCTCAA AACATATATA TAGATAGATA
  K
  ATAGATAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAC CCTGTCTATA TGAGTACTAT
  AGGTATATAG ATATAGCCCT GGCTATATGA TATATATATA A                    
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147148779	ENSMUSSNP3064940	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52082124					SNP	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:103900113 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dab1	disabled 1			Intron
				Noncoding-Transcript-Variant
Rr596428	regulatory region 596428			573 bp proximal
Rr596429	regulatory region 596429			1773 bp proximal