rs52077817 SNP Detail

Summary

• ID
  rs52077817
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148471637 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A ATCAAACCGT GAAGGTGAAC GGCTGCAGAT TTGAAGAACC
  TGAGCCACAG CTGGACCACT GCTGCCCCAG TCCCAGTCCC AGTCCCAGTC CCAGTCCCAG
  T
  CCCAGACCCA GCACCCAGCC CCAGACCCAG CCCCATTCCC ATTCCCATTC CCAGCCCCAG
  CCCCATTCCC AGTCCCAGTC CCAGACCCCA GTCCCAGACC C                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148005016	ENSMUSSNP4784818	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs52077817					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148471637 () rs orientation: forward

Symbol	Name	Function Class
Rr604669	regulatory region 604669	1757 bp distal