rs52077769 SNP Detail

Summary

• ID
  rs52077769
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:121069389 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGCT ATACAGAGAA ACCCTGTCTC
  S
  AAAAACCAAA AACCAAAAAA AAAAA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss137064579	ENSMUSSNP1382035	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52077769					SNP	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:121069389 () rs orientation: forward

Symbol	Name	Function Class
Rr688903	regulatory region 688903	1869 bp distal
Rr688904	regulatory region 688904	21 bp proximal
Rr688905	regulatory region 688905	145 bp proximal
Rr688906	regulatory region 688906	1568 bp proximal
Ulk4	unc-51-like kinase 4	Intron