rs52069504 SNP Detail

Summary

• ID
  rs52069504
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:156365848 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAACA AAATGAGGGC TTGGCAAGAT
  R
  GCTCAGTGGG TAGAGGTGCT TGCTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss145798921	ENSMUSSNP2978716	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss320072354	CHEV_1_158468409	CHEVERUD	SCREENING_POP	f	SNP		G	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs52069504					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:156365848 () rs orientation: forward

Symbol	Name	Function Class
Rr421192	regulatory region 421192	294 bp proximal
Rr421193	regulatory region 421193	1715 bp proximal
Rr421194	regulatory region 421194	1965 bp proximal