rs52051856 SNP Detail

Summary

• ID
  rs52051856
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:147168269 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C CATGCCTGTA AAACACTTAA AAAGCTAAAA TAGAAACTTA
  CTGAATTTGA AGCCATCCTG GGTCACATAA CAAAAACAAA AACAGTACAT TTTTTAAAAA
  T
  GTATAGGTCT ATTTAGTGGA GGTCAACTCT AGAGTTTATC CGTGTTAGGC AAGTGCTCTA
  ATCCCTGGGC TATACTACAC CCCACTCCTA CAGGGTTTGC T                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147907829	ENSMUSSNP4490280	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss147934706	ENSMUSSNP665167	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs52051856					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147168269 () rs orientation: forward

Symbol	Name	Function Class
Rr604464	regulatory region 604464	432 bp proximal