rs52033446 SNP Detail

Summary

• ID
  rs52033446
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:119345743 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACTCCAGAAG AGGGCGCCAG ATCTCGTTAC GGATGGTTGT
  GAGCCACCAT GTGGTTGCTG GGAATTGAAC TCAGGACCTC TGGAAGAGCA GTCAGTGCTC
  K
  TAACCACTGA GCCATCTCTC CAGCCCACGT CATTCTTTTT AGTTTATTTG TTTAAGATTT
  ATTTTATGTA TAAGTTCACT GTTGCTCTCT TCAGACACA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147334436	ENSMUSSNP2017553	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52033446					SNP	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:119345743 () rs orientation: forward

Symbol	Name	Function Class
Exd1	exonuclease 3'-5' domain containing 1	1243 bp downstream
Gm33412	predicted gene, 33412	within coordinates
Rr563519	regulatory region 563519	80 bp distal
Rr563520	regulatory region 563520	96 bp proximal
Rr563521	regulatory region 563521	1628 bp proximal