rs52026289 SNP Detail

Summary

• ID
  rs52026289
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:136134950 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCTTAAGAG TCTTGACTAT
  GCTCCCTACA CATTAGTAGC AAATGTGCAG CTGTGGGACC CCTAACAAGT AGAGCAGGGC
  TTGTCTCAGT CTCTGTTCCC TGCCACTGAA TCACCTTCCC CTACCTTGTT GGGACTCAGG
  GGGAGAGGAT GTGCCTAGTC CTGCTGGGAC TAGATGTCCC AGGGTGGGGT GGTACCCAAG
  W
  GGGGCTCCCC TTCTTTAAGG AGAAGGGGAA GGGCAATAGG TGAAGGGATT GTAAGGGTGT
  GGGACTGAGA GGAGAGGAGG GAGGGGGCTG TGATCCGGAT GTAAGTGAAT AAAAACTAGA
  TAAAGAAAGA GTCTTGGTTA TCAATACCCT CAATAAATAC AATGGCACAG ACGATGCATT
  CCCCAAGCCT GTTGCACTAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147567232	ENSMUSSNP4637050	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52026289					SNP	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:136134950 () rs orientation: forward

Symbol	Name	Function Class
Rr602357	regulatory region 602357	269 bp proximal