rs52022712 SNP Detail

Summary

• ID
  rs52022712
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:7559666 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTATTGAGA GAGTGATATA
  TATGAGGATT TAGAGAGAGG AAAGGGAAGG GAGAACTGTT TTAATTATAT TATAATCTTA
  AAAAGTAGTA GAAAATCATT GAATTAAGTA AATTTTTCAA GTAATTGAGA CTCTATTCAT
  TTTCTGTAGC ACGATTTGAA GAATCGAGTT TTATGATGTT TTCTAAATAA CAAATCAAAA
  R
  GTGTACATAT CAGAAAGTAC ATAAGAAAGA TAATGATATT GCATTACATA TTAGGATATT
  TGCAGGTAAA CTTATTTACA TTTCACAACA TAGAACTTAA AGCAGGAGCA TTCAAAACAA
  AAATAATTAC CTAAAATTAA TCCTCACAGC TACAACATTA CCAATGAAAG CTAGTTAGAA
  CTGTAAACTG TAGCTTTGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss134557411	ENSMUSSNP5163537	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs52022712					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:7559666 () rs orientation: forward

Symbol	Name	Function Class
Gm66025	predicted gene, 66025	within coordinates
Rr573246	regulatory region 573246	1933 bp distal
Rr573247	regulatory region 573247	1630 bp proximal