rs51988842 SNP Detail

Summary

• ID
  rs51988842
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:38700532 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTCCCTCCC TGGCATTCCC CTACACTGGG GCATCGAACA
  CCCTCAGGCC CAAGGGCCTG TCCTCTCACT AATGTCGAAC ATCTCGCTGA TGTCGAACAA
  R
  GCCATTCTCT GCCACATATC TGGCTCTACC CATGGGTCCC TCCATGTGTA TTCTTTGGTT
  GGTGGTCCAG TCCCTGAGAG CTCCAGGGGG CCTGGGCGG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss134840403	ENSMUSSNP1163379	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51988842					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:38700532 () rs orientation: forward

Symbol	Name	Function Class
Rr575691	regulatory region 575691	1471 bp proximal