rs51985871 SNP Detail

Summary

• ID
  rs51985871
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:142247215 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCTG TTCCAGAGCC CAGCTAGCTC
  M
  GGGGAACAAC TCTGTCCTCA GTTTT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
ss147756640	ENSMUSSNP5651639	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C		C
ss321396766	CHEV_4_142110548	CHEVERUD	SCREENING_POP	f	SNP			C		C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
rs51985871					SNP	A	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:142247215 () rs orientation: forward

Symbol	Name	Function Class
Gm70299	predicted gene, 70299	within coordinates
Rr604089	regulatory region 604089	581 bp distal