rs51979026 SNP Detail

Summary

• ID
  rs51979026
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:136009143 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAACAGACA GACAGACAGG
  CAGGCAGGCA GGCATGCAAG GGAACATGAG ACAGACGCTG TCCTTGCCCT GCTTCCTCCC
  CTGCCACTCT TCCCTCCTGT CCTCAGAAAC CCAAGCCCTG CTGGAATGGA GCGATCCTTT
  CACACCTCTG TGCCTTCGCA CAAACTGTTC AAGATGAAAG CTCTCCCTCC CACCCACGGT
  Y
  GGTCTCCACC TCTGAAGTGT CTACAGTCTG CAAGACTGCT GGGGTGTCAC CTCCCACCTT
  CCCAGTGAGA AGGGGGTGGT GGGCGGGGAC ATGACGGGAT GTCCGGCTAG GTGCAGCTGT
  AAGGGCAAGG GAGACCCAGG TCATTTCCTT TGAAATAGAA CGTTCGAAAG TAGGATTACA
  AACACAGAGA CATAGGGTTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss147564479	ENSMUSSNP6639084	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51979026					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:136009143 () rs orientation: forward

Symbol	Name	Function Class
Rr602339	regulatory region 602339	735 bp proximal
Rr602340	regulatory region 602340	1792 bp proximal