rs51975434 SNP Detail

Summary

• ID
  rs51975434
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:59802675 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAAACACCA AGCAGTGTGC
  CTAAGCACCT GCTGTACCAA GGGAGAAGAT GGGACAATGC CTTGTCGGTA CTGAGCACTC
  TCATGCAGTC CTGGCAGAGT TGCCAGTAAG GGTGACATGG TTCTTCTTTG GCAAAATACT
  AAATTGTGGG GCCTGGGGCC CTATCTCCTG ATAGGTCCCA GGCTTAGTGC CTGCCACTCC
  K
  TGTGGATGGG AAAGGGCCCA TGCGACTGGG TCTTGCTTCA AAGGTGGATA GTTTATTCTG
  GGGCGAGTAT GTCCGGCCAT GTCCTGAGGA ACAAAATGGG TTGGGGGTAC TCTGAAAGAC
  ATGCTCTACT GTGGGAGTTA ATCATATATG TTTTAAATCG AGACAGGGAC TCACTATGTA
  GCCCTGGCTG TCCTGGAATT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss146403192	ENSMUSSNP4418681	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs51975434					SNP	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:59802675 () rs orientation: forward

Symbol	Name	Function Class
Rr398296	regulatory region 398296	731 bp upstream
Rr593142	regulatory region 593142	within coordinates