rs51957673 SNP Detail

Summary

• ID
  rs51957673
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:142440061 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGCCACCAT TGATTCAGTC CACAGACATT TGCAGCTAGC
  CATATAACAT AACTCATTCC GTTTAATCTT CATGGTCACA TCCTAACTCC ATATTATTAT
  M
  CCAACCTAGG ATGTAGAAAT TTGAGCCCCA GAAGAATTAG TGGGGAGGTT GTTTAAGGTC
  ATATAGTTAT GGGACAAGAG TTGGAGGCAA GGTCCATTG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147736753	ENSMUSSNP2357021	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C	C
ss320531945	CHEV_2_142423877	CHEVERUD	SCREENING_POP	f	SNP				A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51957673					SNP	A	C	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:142440061 () rs orientation: forward

Symbol	Name	Function Class
Rr566224	regulatory region 566224	971 bp proximal