rs51951164 SNP Detail

Summary

• ID
  rs51951164
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:97978117 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTGATACTA GCATGCTGAC
  AGTTGGAACA CTGGCAGGGA AATATTTAAA GTCTTTGTTT TCCATAATGA AATCATTATG
  TTTCTGTAAG AGCAGAAAGC TTTGTGTGAT TAATAAAAAC ACTACAATTC ATAACCTGCA
  ATAGTCTCAC TCTGAGCTGA GGTGTTTCAA GTAGCATGAG TTGGTACTGC ACAGGGTGAC
  R
  ATGCATGGGG CAAAGCACAC ATGCACCCTG TGCAAGCCTG CAAAGATGTC CTGCAGGGCA
  GCATGGGCCA GTGCTGCCCA AACACCCTGG ACTCATTACT CACTTGACTT TTAATTAACT
  TCTTGTCATT GCATATCTAG AAACATCCTG TTTACTGTTT CCAGTATTTT TGAAACCCAA
  CGTTCAGTTT CACAACTCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss147085091	ENSMUSSNP6344438	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs51951164					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:97978117 () rs orientation: forward

Symbol	Name	Function Class
Nfia	nuclear factor I/A	Intron
Rr367651	regulatory region 367651	1518 bp upstream
Rr595683	regulatory region 595683	within coordinates
Rr595684	regulatory region 595684	1352 bp proximal
Rr595685	regulatory region 595685	1507 bp proximal