rs51944799 SNP Detail

Summary

• ID
  rs51944799
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:156063250 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCACTCCTGG AGTGGATGTA GCACCACTAT ACCTGGACCT
  CAGCTTTTCT GTACCTGGAA CTTGCTCTGC TCCAGGCTGG CCTTGACCTC AGAGATCTGC
  W
  TGCTCCTGGG ATTAAAAATG TGTCTGACTC GGGAGGCAGA GGCAGGCGGA TTTCCGAGTT
  CGAGGCCAGC CTGGTCTACA GAGTGAGTTC CAGGACAGC                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148123399	ENSMUSSNP4176898	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
ss321444245	CHEV_4_155352902	CHEVERUD	SCREENING_POP	f	SNP				T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51944799					SNP	A	A	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:156063250 () rs orientation: forward

Symbol	Name	Function Class
Rr606625	regulatory region 606625	1994 bp proximal