rs51943762 SNP Detail

Summary

• ID
  rs51943762
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:122205703 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGTCTGCTCC AGGTACAGAG CAAGTTCATG GCCAGCAAAA
  TAACTTGGAT GGATCCTCCA TCATAAAAAT GGGGAGAGGG CTCTGTCTAT AAGAGGTAAA
  R
  CACTTGGGCA GCCAACTCAG GAGGATATTT TCGTAATCCA ATGAGTTAAT TTATGTAAGG
  CTCTTAGAAC AGTATCTGTG TAAGGTACAT TATGTGCAT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss60442588	NES15946504	PERLEGEN	MM_PANEL2	f	SNP	G		A	G	A	A	A	G	A	G	A		G	G	G		A
ss135741047	ENSMUSSNP5013502	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A						A
ss320911390	CHEV_3_122114972	CHEVERUD	SCREENING_POP	f	SNP												G				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs51943762					SNP	G	G	A	G	A	A	A	G	A	G	A	G	G	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60442588	NES15946504	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:122205703 () rs orientation: forward

Symbol	Name	Function Class
Rr584323	regulatory region 584323	159 bp distal
Rr584324	regulatory region 584324	1688 bp proximal