rs51939819 SNP Detail

Summary

• ID
  rs51939819
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:55682815 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAACCCAGG AACAATGAGT
  ATGCTGAGAG AGGGTGATCC TAGGACAGGA TGCTGATGGT CTTTGCTTTT GTTTTTGTCT
  CATCTCCCTT GTCAATCAAC TAGAAAAAGG TAACACTAAC AAGGGAGATT ATTCCTCTGA
  AAATGGCCAA ATGATTAATC CTATGAAATA TCCTAGACAT AAGAAGAAAG GTATTTTGGT
  Y
  ATGAGCCTAG CCTTTAATGG CTGAGCCATC TCTCCAGCCC AAAATACCCA TGGAAGGAGT
  TACAGAGACA AAGTTTGGAG CAGAGACTGA AGGAATGACC ATCCAAAGAC TACCCCACCT
  GGGGATCCAT CCTATATACA ACCACCAAAC CCAGACACTG TTGTGGATGC CAACAAGAGC
  TTGCTGAAAG GAGACTGAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss133214645	ENSMUSSNP4636839	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs51939819					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:55682815 () rs orientation: forward

Symbol	Name	Function Class
Rr406317	regulatory region 406317	1033 bp distal
Rr631016	regulatory region 631016	1436 bp distal