rs51928969 SNP Detail

Summary

• ID
  rs51928969
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:7559667 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTATTGAGAG AGTGATATAT
  ATGAGGATTT AGAGAGAGGA AAGGGAAGGG AGAACTGTTT TAATTATATT ATAATCTTAA
  AAAGTAGTAG AAAATCATTG AATTAAGTAA ATTTTTCAAG TAATTGAGAC TCTATTCATT
  TTCTGTAGCA CGATTTGAAG AATCGAGTTT TATGATGTTT TCTAAATAAC AAATCAAAAA
  R
  TGTACATATC AGAAAGTACA TAAGAAAGAT AATGATATTG CATTACATAT TAGGATATTT
  GCAGGTAAAC TTATTTACAT TTCACAACAT AGAACTTAAA GCAGGAGCAT TCAAAACAAA
  AATAATTACC TAAAATTAAT CCTCACAGCT ACAACATTAC CAATGAAAGC TAGTTAGAAC
  TGTAAACTGT AGCTTTGTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss134557414	ENSMUSSNP3131884	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51928969					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:7559667 () rs orientation: forward

Symbol	Name	Function Class
Gm66025	predicted gene, 66025	within coordinates
Rr573246	regulatory region 573246	1934 bp distal
Rr573247	regulatory region 573247	1629 bp proximal