rs51922314 SNP Detail

Summary

• ID
  rs51922314
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149927660 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCAG GATGTTTATG GCCCAGGAGC
  Y
  CATGTGCAGG GTGGGTAATC TCAAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss148041481	ENSMUSSNP1915324	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
ss321426945	CHEV_4_149217312	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51922314					SNP	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149927660 () rs orientation: forward

Symbol	Name	Function Class
Rr605073	regulatory region 605073	1826 bp distal
Rr605074	regulatory region 605074	1953 bp distal
Rr605075	regulatory region 605075	1003 bp distal
Rr605076	regulatory region 605076	1096 bp distal
Rr605077	regulatory region 605077	614 bp proximal
Rr605078	regulatory region 605078	1826 bp proximal