rs51909344 SNP Detail

Summary

• ID
  rs51909344
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:137690755 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGGA AACCCCACTA ATTTACCCCC
  A
  GGGAACCCCA GGCTGTGGAG AAGGC                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss147627551	ENSMUSSNP2545154	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss321369362	CHEV_4_137519359	CHEVERUD	SCREENING_POP	f	SNP		A	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs51909344					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137690755 () rs orientation: forward

Symbol	Name	Function Class
Ece1	endothelin converting enzyme 1	mRNA-UTR
Rr602798	regulatory region 602798	539 bp proximal
Rr602799	regulatory region 602799	596 bp proximal
Rr602800	regulatory region 602800	973 bp proximal
Tssr39801	transcription start site region 39801	380 bp upstream
Tssr39802	transcription start site region 39802	1030 bp upstream