rs51904236 SNP Detail

Summary

• ID
  rs51904236
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:8104397 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTGTATTGGT CTATGGACAT GTTTGTGGGG GTTGTCTTAA
  GTCAGTTAGT CAACGTGGAA AAACACAGCC CACTCTGGGT GGCACCATTC CTTGGAAGGG
  R
  CCCTAAACTG TACACGAGTG AATAAATAGA ACAGAACATA CAGGTAAGCA ACTGAGCATG
  CATGCAATCA TCCTCTCTTT GTCCTTGACT GTGGATGTG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss132961618	ENSMUSSNP2035168	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51904236					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:8104397 () rs orientation: forward

Symbol	Name	Function Class
Col28a1	collagen, type XXVIII, alpha 1	Intron
D6Mit348	DNA segment, Chr 6, Massachusetts Institute of Technology 348	710 bp proximal
Rr626348	regulatory region 626348	531 bp proximal
Rr626349	regulatory region 626349	1409 bp proximal