rs51893516 SNP Detail

Summary

• ID
  rs51893516
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:119541894 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TACAGAGATC CACCTGCCTC TGCCTCCTGA GTGCTGGGAT
  CAAAGGAGCG CACCACCACC TCCCCGCTCA CATTTATTTT TAAAGAATAG ACCAGAATGG
  Y
  CCCTATTCCA GGTGCACAGG GAAGGATGTG AGTGAGCCGT CTGCCCAGGC AAGGATGGGA
  AAGGTGAAAT GCCTGCAGAT TCAATGACAC AAAATCACA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss133591028	ENSMUSSNP5027788	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss321928720	CHEV_6_119514951	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51893516					SNP	C	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119541894 () rs orientation: forward

Symbol	Name	Function Class
Gm44317	predicted gene, 44317	1291 bp upstream
Rr637714	regulatory region 637714	1255 bp distal
Rr637715	regulatory region 637715	587 bp proximal