rs51882802 SNP Detail

Summary

• ID
  rs51882802
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:22042451 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGAG GCAACAGCTT CGTCCGTTGG
  R
  GTTTAAAGTC TAACGCAAAC CCTGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320683717	CHEV_3_21887209	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs51882802					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:22042451 () rs orientation: forward

Symbol	Name	Function Class
Rr367416	regulatory region 367416	250 bp downstream
Rr367417	regulatory region 367417	within coordinates
Rr574182	regulatory region 574182	885 bp distal
Rr574183	regulatory region 574183	within coordinates
Rr574184	regulatory region 574184	1 bp proximal
Tssr32754	transcription start site region 32754	450 bp upstream
Tssr32755	transcription start site region 32755	8 bp upstream
Tssr32756	transcription start site region 32756	5 bp downstream