rs51873622 SNP Detail

Summary

• ID
  rs51873622
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:81666900 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAATCGAAC TATTTTAAAC
  TGAATTGGAT CAATTAAATG ACAACCATGA AATAATCTGC AGACTCAGAG AGTCTAAGTA
  ATAAGGATGT CTCTGAGAGA CACACGGATC TCCCTAAGAA CAGAAAATAG AATGGATTCT
  GTGAGAAGAC TGGGAGCTGC TGGGTGGGGA GTGGACCAGG AGGAATCATG TGGTGGGTTG
  K
  TGAAAAGAGG ACATAGAGGA ACAGGTCTGG AATTGGAGGG CATTTGGGAG ATAATGTGAA
  GACATAGTGC AGTTGAAACT CCCTGGAATC TATGAGGGCG ATGCTAAAGA AGACTACTAA
  TAATAGAGGA TACAGAGCCT GTACTGTCCC TCTCCTGTAC CCAGACAAGG GTTATAGCAG
  TGTCACTGGG ACAAAAACCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss60421980	NES15919480	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	G	T	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs51873622					SNP	T	T	T	T	G	T	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60421980	NES15919480	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:81666900 () rs orientation: forward

Symbol	Name	Function Class
Rr578714	regulatory region 578714	703 bp proximal