rs51866970 SNP Detail

Summary

• ID
  rs51866970
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr11:60092952 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C TGTCTGGCTG ATAGGGGAAA GCAAGACCCA GAGAGGCTCT
  GAGAACAGAG TCTGGCTACT CAAGAGGTTG GACAAGGCTT TCCCAGATGC CCTTGTTGTA
  R
  GTCTTGCCTG GGAGTGACAC AGACAAACTC ACCTGTCTCC GTCAGCTGCC CCTGGGCTGG
  GCTGAGCAAT ACAGTTCAAC GCTCGCTCTA GGAGATGTTC A                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss132249191	ENSMUSSNP5862890	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51866970					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:60092952 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cpgi2979	CpG island 2979			1951 bp distal
Mir6921	microRNA 6921			1509 bp upstream
Mir6922	microRNA 6922			136 bp downstream
Srebf1	sterol regulatory element binding transcription factor 1			Intron
				Noncoding-Transcript-Variant