rs51857744 SNP Detail

Summary

• ID
  rs51857744
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:147516596 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A CCTTCTTCCT GGCCAAAGAA CAGACATTGT GAGCCAGTGT
  TAAGCCTTCC ATCTTTGATC TCCTTCCTTG TTTTGTAGTC TTGCCCAGTG ACCGTATTGC
  G
  CAACTTTTGT ACATAAATGT TATCTGATTC TTAGTCAGTC CTTGAGAGTC TGGGAGAGGT
  GTCTAGGACT TTACCTTAAG TAGAGTTGGT GTTATAAGAC T                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss147960046	ENSMUSSNP6401338	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs51857744					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147516596 () rs orientation: forward

Symbol	Name	Function Class
Rr398816	regulatory region 398816	1722 bp downstream
Rr398817	regulatory region 398817	849 bp downstream
Rr398818	regulatory region 398818	1762 bp upstream
Rr604487	regulatory region 604487	16 bp proximal