rs51849570 SNP Detail

Summary

• ID
  rs51849570
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:18393343 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACTATTCC TTTAGTTGTT
  ACGATAAAAA TCAAGGCTCT GACAGCTATA ACAAACTAAG CGTGCTCAGG AGTCCTCAGT
  GTGCCAACCC AAGAGTGAAG ATGATAGTGA AATTTAAAAA GAGGATATTT ATTTAACCCA
  GGCACATTAG CCAGAATAAT GATCTGAAGT GACATTCAAT TCAAAATAGA AAGTCGGAAT
  R
  TGTTGAACTA TGCACTGTAG TCAAGGTGTG GCCCTACACA CAGCCTTTTC TTAGCTGCCT
  CCACCCTTCA GGAAACTGAA AATGCCTCTG GGGAACAAAT TCTCTATTGG GTTTGCACAA
  GAGCCTCAGC CCCTTCCTTT CCCAGCATGA GTTTCCTTGA GAAGTTTCAC TTCCTTGGGG
  TTCATTGTCT CAATAGTCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60376128	NES15871309	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51849570					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60376128	NES15871309	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:18393343 () rs orientation: forward

Symbol	Name	Function Class
Gm65503	predicted gene, 65503	within coordinates
Rr374602	regulatory region 374602	within coordinates
Rr573896	regulatory region 573896	within coordinates