rs51830851 SNP Detail

Summary

• ID
  rs51830851
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:134906242 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCATTTCAG AGTTCTAAGA
  TCTTTCCCTT TTGTAGGACC AGCCTAAGAT CAACCGCCAA CAAGAAGTTC CTGTTTTCCC
  AGCCTAGACC CTGGACCCTT TCCTACCCAG TAGCGCCACA GGATTCTAAC CACAACTAAT
  GCAAGACCTG TCCCCAGGTA CACCCAGGGT GGGTCACCCA GCAGGACCCC TCCCTGGGTT
  R
  GAACAGGAAA CTGTCTTCAC AGCCCACATG CTTCTACTTG GTTTATCTGA GGGTGGACCT
  GTAGGTGGCC GCTACAACTG AAGAGCAAAA CCCCTGACTG TATTTAACTC CTGTCACCTG
  CATCCCACTT GTCAAAAGGA TACAGACTAA GAGATGTCCC CCGCTTAGCT GGAGGCAGCT
  GGAGGAAGCC ATGCAGTTAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
ss147540845	ENSMUSSNP2502820	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G		G
ss321351087	CHEV_4_134734846	CHEVERUD	SCREENING_POP	f	SNP				A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
rs51830851					SNP	G	A	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134906242 () rs orientation: forward

Symbol	Name	Function Class
Rr601942	regulatory region 601942	within coordinates
Rr601943	regulatory region 601943	205 bp proximal
Runx3	runt related transcription factor 3	941 bp downstream