rs51828936 SNP Detail

Summary

• ID
  rs51828936
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:114441364 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAACTATAC AGACTTTAAT
  TTTATACATT TCTAGAGGCA CATCCTGAAT CTAGCCCAGT AATCTAAGTT CATTCCTACA
  TATACCCTTG ATTTCAATCT CCAAGTTAAA GCAAGCAATT TTGAAAGCCT TGGGCTTATT
  CTACATCCTA ATGTCAATCA ATCTGCCAGT GCACCTAAGG CTCCCAAACA ACTGTTTACT
  T
  TTCAGTACAT TTTATTCAAT AATAGTAGCA GAAGTGATCT GCATTTTTAT TTTATGAAAT
  ATGATAATTC TAGGAATTAT TTAAAGATTT TGGTTTTTAG TCTTTCTTAT ATTACATCTA
  GACCACAGCT GCCAGAGCAT CCTCTCTTCC AAGTCCTTCC CTTCTCCCTA CCCAAATACA
  CTTTTCTGGA ATTTCCTTTC                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss138784439	ENSMUSSNP4763064	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51828936					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:114441364 () rs orientation: forward

Symbol	Name	Function Class
Igh	immunoglobulin heavy chain complex	within coordinates
Ighv10-1	immunoglobulin heavy variable 10-1	1263 bp downstream
Tssr3975	transcription start site region 3975	1747 bp downstream
Tssr118082	transcription start site region 118082	1762 bp downstream