rs51825748 SNP Detail

Summary

• ID
  rs51825748
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:4654772 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACTGTTTCC CTTATGGAGA
  TTGTAGTCCT GAAGACCAAA TGCGAAGTCA CAGTGAGGGC ACAGACAGTG GCACACACTT
  GCCCTCACAG CAGAACAGGG CCCTCCTGTG TGCTCACTTC CTGTCTCGAT GCCATGTCCT
  CGCCTCGCTG CCAGCTCTTC CCTCACTCCT GTACACCAGT GGATCCTCAA AGAATCAGGC
  Y
  GTTTCTCTTG CTTGTGGCTT AGTTCTCTTG CCTCTGGAAG AAATAGCTAC TTCCTTTGGT
  GACCCAACAT TATTGCCCTT AGACGACATT GAATCTGTGC ATGTGGAATG TGTCACCTAC
  GACAAAGTAG TCAGCAGGTA AGAACAGAGA AGACGGTAGT GAAGACAGAG TTCAAGGTGC
  TGAATGTCCA CTCAGGACAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss132932412	ENSMUSSNP190107	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs51825748					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:4654772 () rs orientation: forward

Symbol	Name	Function Class
Gm38761	predicted gene, 38761	within coordinates
Rr626043	regulatory region 626043	1754 bp distal
Rr626044	regulatory region 626044	1839 bp distal
Rr626045	regulatory region 626045	644 bp distal