rs51818038 SNP Detail

Summary

• ID
  rs51818038
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:55678924 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTACATGGC ATTTTCTCTA
  AATACCTTTT AGAAAAAAAT GGAGACTATA TAGTATCTAC AGCAGCTACT GATGTTGGCT
  GTAATTATGG TTCTAGGTAG CCTTATCCAA CAAGGGCTCA CTCTGACCAA GTGCCACCTG
  TAATACAGGA ATGGCTAGTG TCAGTCTTCA TCGCAGAAGA ATATTTGGTC TATGGGGGAG
  K
  TGTAAGAAAC ATGTAAACAA CAACAACAAC AAAGACCCTA CTATTTAATG CTCAATCAAG
  AGATACAGAT ATTTCCTCTG AGGGGCTTCA AAGGCAGTGC TAAACTTTTA TGCTTGTCCC
  TATGTGTTTC CAGTCTTCAC AGTTGCTCCC AATCCCGTTT ATCAGCTTCG ATTCTTTTCG
  AATGACTAAA GGGTAAGTCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133214588	ENSMUSSNP5700275	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51818038					SNP	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:55678924 () rs orientation: forward

Symbol	Name	Function Class
Rr406317	regulatory region 406317	1760 bp proximal
Rr631015	regulatory region 631015	635 bp distal
Rr631016	regulatory region 631016	1902 bp proximal