rs51804025 SNP Detail

Summary

• ID
  rs51804025
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:144286293 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTTAAACA AAGAATGAAA
  TGGATTATAG GAGGCAACTA GGGAGTGGGT ATGACACTAA TGGACAGTCA ACATGGAGTC
  CCTCTTGACC ACAACTTTGG CTCTTCCACC TGTTCTACTT CCATCCACTG TGTCCCACTC
  ACATCTTTCC TTACCTTAAG AGCCTCAAGC TGCTTCAGTT TCAGAGTTTT GTACCTGCAA
  Y
  TCGCCCTACT TGGAGTGAAT AGAACAGGGT TGTGATAGGT GATGTATCTC TGTGGATACT
  GAACCTAAAA AGCATCAGGA CTTCAACAAC TCACATAAGT AGTATTTCTA TGTTTTTTTA
  CACCACTGAA GAGCATGGCA GTCTAGGCTT CCAAAGGTTT CTGGGATTGA GAATTGCTCC
  TGGACAGGGG TAGGAACCAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147827728	ENSMUSSNP1639488	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51804025					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:144286293 () rs orientation: forward

Symbol	Name	Function Class
Aadacl4fm2	AADACL4 family member 2	Intron
Rr604231	regulatory region 604231	274 bp proximal