rs51795718 SNP Detail

Summary

• ID
  rs51795718
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:13841498 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTT GATTCCTTGT ATCACCAAAC
  W
  TAGAAAAAAA ATTTTTTTTT GAGTT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss133003928	ENSMUSSNP902020	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs51795718					SNP	A	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:13841498 () rs orientation: forward

Symbol	Name	Function Class
Gpr85	G protein-coupled receptor 85	1557 bp upstream
Rr626596	regulatory region 626596	1137 bp distal
Tssr59849	transcription start site region 59849	1989 bp upstream
Tssr59850	transcription start site region 59850	1965 bp upstream
Tssr59851	transcription start site region 59851	1591 bp upstream
Tssr59852	transcription start site region 59852	1558 bp upstream